;; This buffer is for notes you don't want to save, and for Lisp evaluation. ;; If you want to create a file, visit that file with C-x C-f, ;; then enter the text in that file's own buffer. maximum_oligo_size = 70 minimum_oligo_size = 50 maximum_match_len = 16 minimum_match_len = 10 maximum_gc_content = 70 minimum_gc_content = 30 candidates_per_gene = 5 probes_per_gene = 1 minimum_similarity = 75 minimum_temp_separation = 20 DNA_concentration = 1 Salt_concentration = 75 single_strand_only = 0 18513 target sequences. 18513 total sequences. 30348312 total DNA bases. 16380 is the longest sequence length. 29 sequences were dead due to short overlaps with others. 5880 sequences were dead due to long overlaps with others. 97 sequences were dead with no good probe candidates. 55169 initial best probe candidates detected. 1135 sequences without probe due to temperature conflicts. 11372 total oligo probes designed for 11372 sequences. 66.35 C is the optimal estimated experiment temperature. total time elapsed 7753 seconds